| Protein: | nrs-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nrs-1.
| Description | E-value | Query Range |
Subject Range |
|
|
545.0 | [0..1] | [545..14] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MSKLYIDTDA GSDQHPGTEA QPLATLVQAM LISKNSGEFL MKKKSEEGES WEPAAKAAIK 60
61 KAVKKYEAEV KKLEKAGCRE KEAEEAQHAA LEEAKKITFS LDKS
|
| Detection Method: |  |
| Confidence: | 1.89 |
| Match: | 1ru4A |
| Description: | Crystal structure of pectate lyase Pel9A |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [105-545] |
1 11 21 31 41 51
| | | | | |
1 LPEAKVIKIG ESVQHRDQRV SIKAWVHRLR RQGKSLMFLV LRDGYGFLQC VLNDKLCQSY 60
61 DAVTLSTETS VQVYGIIKAL PDGKSAPDGH ELTVDYWEVI GKAPAGGIDN VLNESAGVDV 120
121 MLDNRHLVIR GENASRILRI RAAATRAMRD HFFAAGYTEV APPTLVQTQV EGGSTLFGLD 180
181 YYGEPAYLTQ SSQLYLETCN AALGDVYCIS QSYRAEKSRT RRHLSEYQHV EAECAFITFD 240
241 QLMDRIEALV CDTVDRLLAD PVTKSLIEFV NPGYKAPARP FKRMPYKEAI EWLQKNDVRN 300
301 EMGEKFVYGE DIAEAAERRM TDTIGVPILL NRFPHGIKAF YMPRCADDNE LTESVDLLMP 360
361 GVGEIVGGSM RIWKEDQLLA AFEKGGLDSK NYYWYMDQRK YGSVPHGGYG LGLERFICWL 420
421 TDTNHIRDVC LYPRFVGRCA P
|
| Detection Method: | |
| Confidence: | 109.0 |
| Match: | 1x54A |
| Description: | No description for 1x54A was found. |
