YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE05654
Organism: Caenorhabditis elegans
Length: 531 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05654.

Description E-value Query
Range
Subject
Range
gi|84569994 - gi|84569994|gb|AAI10893.1| PIGT protein [Homo sapiens]
697.0 [0..13] [493..19]

Back

Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILTSYLLL SILSSCHGLS ENFDEKLTLS PVSKNELRVD FRFNSEREFN RKTESGDYLT  60
   61 FPRIIQELLS RYSVRKLTVT MAHGRWNLIG WGLPPQPSSP TGAQVFAEFE ADQQEDADER 120
  121 MKFLVEALNG VLCTSISHIN VITSPEFIVL KNHGGETSVH KRYGVLSGET TCTENLTRLR 180
  181 KLLACKENGI STLLHPSKLY NSVYHSSHLV VEQQCDKDQC NSKMEVGVSV VMR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPSQKTQRHW SLADVFERKL GSQCKVARSS KIHVIGTTGE ITTTDVKNLT TINGEEPFEL  60
   61 YIPITDISMK QSVVKAWSSQ GGFEQKHGVL TVHITNDESA SEIHVSQIIP YYVHLRYSKI 120
  121 NWKCDKNGVP RIEKIFKNSK SLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [377-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APTLLQYKMK LSAGQTCELT IPFDKQLLRL EQYPPDANHG MHIPAASVYI QKSTSTYTIH  60
   61 SNAILVLLPV PDFSMPFNVI CFVATAFALV FGPIQLYSTL WLAPVVKKSQ WGRKIHRAIL 120
  121 LAIIAFCLYA HMMDINLNEI RRGIETYFEK LNELK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle