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View Structure Prediction Details

Protein: CE05628
Organism: Caenorhabditis elegans
Length: 500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05628.

Description E-value Query
Range
Subject
Range
gi|39581300, gi|... - gi|39581300|emb|CAE72321.1| Hypothetical protein CBG19465 [Caenorhabditis briggsae], gi|187024162|em...
636.0 [0..1] [498..1]

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Predicted Domain #1
Region A:
Residues: [1-500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIVCHPIL DSQNGIATDA VIKKQRPPPL VLSRPKDLIQ EACQRLVLSD QQLRRIMQSM  60
   61 EKSMEQGLAT STKKVAVKML PTYVDSVPNG TESGDFLALD LGGTNFRVLH IKLQGKETKM 120
  121 TGKIFRVPES IMRGTGEALF DHIAGCMAKF MGENDLKDAQ KLPLGFTFSF PCEQEGLTKG 180
  181 KLVTWTKGFK ASGVEGVDVV TLLHEACHRR KDIDIDVVAL LNDTVGTLMA CAFQENSCQI 240
  241 GVIVGTGTNA CYMERLDRIP KLAGYVDEHG VTPEEMIINT EWGAFGDDGA LDFLRTEWDE 300
  301 VVDRESINPG QHLYEKMISG MYMGECARVV LEDLAKQGLL FGGNSDAISV PHCFPTKFVS 360
  361 EIDSDLLEDD DRTFQKTYQI LEDIGVEMIT ANDCANVAYV CSLISTRAAH LTAAGIAMLL 420
  421 NRMNKKHVTV GVDGSVYRFH PTYPTLLDAK IGELIVGDIE YKLMLSEDGS GRGAALVAAV 480
  481 ATRLKEEKLA ASLSSSSSNQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 169.0
Match: 2nztA
Description: No description for 2nztA was found.

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