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View Structure Prediction Details

Protein: eat-5
Organism: Caenorhabditis elegans
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for eat-5.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
418.0 [0..4] [397..6]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMLGSMFSM VKPRLDDLGT DRLNYYYSTL IIMGMSLTIT ARQYVGSPLQ CWVPAQFTKA  60
   61 WEQYAEDYCF VYNTYWVKPN DKVPLTVEER VSQQLIYYQW APFIMAIEAA FFYLPVIFWS 120
  121 ML

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STKSGINIIK LVETAQKAEG AESEERKKQI DIICRHISNN LRKRRNEEET TKMAKIQRIF  60
   61 GMQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [186-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HGKYITNVYL VTKLIYMTNS FLQFYSTNKF LGQNDPYWGM RILDDILKGT DWEHSGNFPR  60
   61 IAMCDFQVRV LGNLQRYSIQ CVLTLNMFNE KIFLFLYIWF LLVFFVTLFD SIFLCYNMFS 120
  121 SHKLVEFLQQ FLDNQDQDEN DEKKPEERKV YRKEQHSILL SEFCLHKFTP DIIILLKMIN 180
  181 NHTGDIVCTE IVGRMWNEFL ERDAKLVLQR FVDNDHHMET KSSSLKSEKL FEEQRSFI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle