| Protein: | CE05599 |
| Organism: | Caenorhabditis elegans |
| Length: | 511 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05599.
| Description | E-value | Query Range |
Subject Range |
|
|
366.0 | [0..2] | [511..572] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MSDHEEESHG ASPTSPASSG ASSPLAPISP RSEGNAPESP SGDVQDIYKD ESFEAPASPA 60
61 RDSSAPASPS AASPAGSRSP SPSPVKTKSK VMIDSDEDSD AEESANKRAL IDSDASDAEG 120
121 KKRRVMLDSD DSDHEGTSKK EPTTKNLFGD DSDDDDEDRP KKTNDLDEFV EGRDEEESQE 180
181 TSKPAYDSDD DDGPVDRHGR HFEWDFDKML AEKKAERKKK TRRG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [225-307] |
1 11 21 31 41 51
| | | | | |
1 GKDGGIDIIN DDDGTVSRLV ERMKHAAKSD RNANIERKPA FQKIKMLPEV KAIMLRAGIV 60
61 EVLIENGFMS ALSEWLAPLP DKC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [308-373] |
1 11 21 31 41 51
| | | | | |
1 LPALDIRITV LKLLHNPRFW KLDRSTLKQS GLGKAVMMLY KHPNETKENK GIANKLIGEW 60
61 ARPIYH
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 1wjtA |
| Description: | Solution structure of the N-terminal Domain I of mouse transcription elongation factor S-II protein 3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [374-511] |
1 11 21 31 41 51
| | | | | |
1 LDTDYSTVSR QEREERDYSR MPEKRKKKIN SRDEEEPNDD DQPKRPRIRD ADEMGPTKSD 60
61 DLKPGDKGYI PRARVPKPST KDYVIRPEWR VTGAFKGEKK STGNNRYDQT FRDFQERTKK 120
121 SKANRIVKVS LEGRNMGI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
