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View Structure Prediction Details

Protein: inx-14
Organism: Caenorhabditis elegans
Length: 432 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-14.

Description E-value Query
Range
Subject
Range
gi|54398902 - gi|54398902|gb|AAV33850.1| pannexin 2 [Aplysia californica]
400.0 [0..14] [426..14]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWEIPIIGD FITKPFKAAK LYEFYDRLHL FTVYLLGFFV LLTGAKQHFG NPIDCMLPKQ  60
   61 HDDLKSWRDY IHNFCLFYGT FRYDVSNGTS EFGSYTEDAS VN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YYQWVPFFFA FQVCCFLLPF WCWAYMQKLI YIDMAFIVDY SGKINSEKTF EKTKEKVDRI  60
   61 VNYMHDHFKF RRAHKMGYLS WITFNSAFPS VLYSLTKLFF ITNVIIQVNL VCKFLDV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [220-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSWTWGFDLL GKFIHPTPRA PEFSSFSDKQ RFAAILTDGS YNRFQYFPIL VGCEYQLQES  60
   61 VSNFVNHKAQ CIIPMNVINE KIFIGLYFWL LVLTALSVIG TVKWILRIKS KKLNEVMIYK 120
  121 LIKKSLEREP FDSNIHDHRY NFVHKYLCAD GILLIYFMMD TNGFLKTEEV IGALFKKYCS 180
  181 DAGLEPTAPT LTSSPRDLAY SETNYGFAAP QKI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle