| Protein: | CE05501 |
| Organism: | Caenorhabditis elegans |
| Length: | 384 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05501.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..8] | [306..363] |
|
Region A: Residues: [1-384] |
1 11 21 31 41 51
| | | | | |
1 MNLTALDELV ELRAMAEAEL LCAHYETYTP VRFVLIMVAT VIASLGTIGN ILLLIVFSAK 60
61 QISNTPATLY PSVLACLDFA ICFEYILLFG VDALVSYLKI ESLFSLYYVY IVPAYVMARI 120
121 TQLAIPYMLI FATLERLFWT SKNKSNLLKA FHSTTGRHIT VIVSLIMCIL LRSPSAFAIR 180
181 VDEYPKCPDF FRTKTTNPRE WALESQLYHF FDFQVMTIAQ TLVPFVLLVG LNLIIVRRMC 240
241 SDSVQKEKLP EPTEVCFKED RLLTQITPVH KSSTTIGLSF PPLKSMSPAV RSAVFTMAAI 300
301 VTSYLISNIL HLSLTVLERS GHQILKSEED PQMSSTFHTF FSDLVSFVYM FTSAIRIVIY 360
361 YLCNPKIRGD LIDFFANRKN AVYL
|
| Detection Method: |  |
| Confidence: | 34.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
