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View Structure Prediction Details

Protein: CE05168
Organism: Caenorhabditis elegans
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05168.

Description E-value Query
Range
Subject
Range
gi|187034488, gi... - gi|39593756|emb|CAE62049.1| Hypothetical protein CBG06065 [Caenorhabditis briggsae], gi|187034488|em...
gi|157755883 - gi|157755883|ref|XP_001670285.1| Hypothetical protein CBG06065 [Caenorhabditis briggsae AF16]
318.0 [0..1] [297..1]
CE05753 - lipase status:Confirmed UniProt:Q19891 protein_id:CAA96636.1
301.0 [0..4] [297..1]

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Predicted Domain #1
Region A:
Residues: [1-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSLTLSFSL VFLTFVQARV IVDPVAFATY DDDTARNKFF PLAAAAYSSN PQTCLSAKFK  60
   61 NAQLRRQVNV QCDTGKNDIC SAYTALLAGN NAIVLSFRGT QGFLQLIEEA DKSVFQSQSQ 120
  121 WVAGGKVSKY FGDAFNKLWN GGMKDDFNNL FHNNPKFEVW VTGHSLGGAM ASLAASFLIA 180
  181 NNIVPGNQVK LVTYGQPRTG TTPFAVAHDA QMAYSYRVTH NRDIVPHIPN EGMEDYKHHK 240
  241 AEVFYKESMN AGASFKVCSS SDESNDCSNG LLITASVSDH LTYFTKDVSQ WGEAGCN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.0
Match: 1tglA
Description: A SERINE PROTEASE TRIAD FORMS THE CATALYTIC CENTRE OF A TRIACYLGLYCEROL LIPASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle