| Protein: | CE05155 |
| Organism: | Caenorhabditis elegans |
| Length: | 577 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05155.
| Description | E-value | Query Range |
Subject Range |
|
|
571.0 | [0..2] | [542..177] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 METEFGLTEY ASEHTITPVP CLLKEMYSDF IVQEILADHT VLAIPSPDVV LESTGSKKED 60
61 IEIEECVAKP DCISEETLAA LNDRFSTKGD PVLVKV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-577] |
1 11 21 31 41 51
| | | | | |
1 DDLSKEDRKS IHHFIRERYA GVLITETKED GILVSHGHTK SSRKRKLWDE KVPKECHFTI 60
61 CKENKETSFA CQLIAKFLNV GPNNIRTHGI KDKRAVTSQR VSVTKVHERT ILDLNSKLRG 120
121 IRVFGCEYKD DPVQMGAHWG NRFSIVLRSL PDDSEQLLHQ RLETFQNTGF INYFGTQRFG 180
181 SRSSTTAEIG LAIVKRDWEK AVKMIMTNAM PDHLGYGSVG YAAKCFSQTG DARKAFSKLK 240
241 GAQAFATVEG NILKCLSKGG TWQNCITEAI PIQSRSLYVH AYQSLIWNKV ASRRVKEYGT 300
301 RVHESDVGAN GFSLGEHATH YDIHIPLPGE NLPFEGSYGA KWISELLEED GLTQSSFTAL 360
361 KDRFSLGESS RCLFVEAKEL KWKFIRYGNA RDLLQDGLQT RAIPEAEQKG PLLALQIQFS 420
421 LISGSYATVA LREVTGSDMG KKAMRDASFK TRGDDEKTEE NVLEEKGSDD ANELNLVSED 480
481 Q
|
| Detection Method: | |
| Confidence: | 90.0 |
| Match: | 1z2zA |
| Description: | Crystal Structure of the Putative tRNA pseudouridine synthase D (TruD) from Methanosarcina mazei, Northeast Structural Genomics Target MaR1 |
Matching Structure (courtesy of the PDB): |
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