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View Structure Prediction Details

Protein: CE05103
Organism: Caenorhabditis elegans
Length: 575 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05103.

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
361.0 [0..2] [570..133]

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Predicted Domain #1
Region A:
Residues: [1-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRAIILAT LVVTVYGQCP ALSGACRCAP SVYEPVAIIC QNAGSLQNAI QAIQAARDIP  60
   61 IDSLTILDTA IPTIPANAFQ SFTILRLVLN RNTLQNIDDQ AFNGPLLDSL IELDLNDNNL 120
  121 GQIPQTGIPR LRNLRKLYLN RNRINQLSST AFNAFESRDL LLKLELAGNR LTDATLGDAT 180
  181 VFRPLTLLQE LSLETNSLTS IPSSALVNQR NTLTNLNLGL NSINEVPVGA LDFPVLSSLS 240
  241 LEFNGITVIP PQAFQGVPNL QFLYMTGNKF PSWAPEMFRY ITQLKTLGIG ETPISVIPNN 300
  301 AFMHIPNLIR LEMSEAAVDT IERGAFQRTP QIQAIVLNKN RLSQVRADFF EGLNDLYSID 360
  361 LQGNRIDNVQ PLGFANLPAI SHLDISYNLL QTMPSNVFQN SFLPQPNDRR VIYACGNPWY 420
  421 CNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.522879
Match: 2id5A
Description: No description for 2id5A was found.

Predicted Domain #2
Region A:
Residues: [424-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELEWFRTLLR DNLDIDVEKP GCTAVCTSSP NGCPVEGTPL RSVDFCQNNE EAQP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 2v9sA
Description: No description for 2v9sA was found.

Predicted Domain #3
Region A:
Residues: [478-575]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVGRALSMVG WIILAVIMTI LLISICLLAM VRYGMSHQRK KQKDAEVAAE EYHHQTTATS  60
   61 IYNAPISVVD RPYSTVPPVN LDLPAAYTLD DRPNNYLY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle