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View Structure Prediction Details

Protein: mlt-7
Organism: Caenorhabditis elegans
Length: 724 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mlt-7.

Description E-value Query
Range
Subject
Range
gi|157749389 - gi|157749389|ref|XP_001678408.1| Hypothetical protein CBG03680 [Caenorhabditis briggsae AF16]
gi|187036419, gi... - gi|39595097|emb|CAE60134.1| Hypothetical protein CBG03680 [Caenorhabditis briggsae], gi|187036419|em...
714.0 [0..1] [724..1]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLHRNLSL LFLICILNEY RIESQTLSPP ITDRFKCLTN GCCDHHEWCR FWASIGECNA  60
   61 NKDWMTENCQ LACGTCTAPA APLLPVTTTA SSF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-724]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGGGFVQTTT QSSGPTTTIT IPPSSLTSVT SCERVKDSIA QASELMSISR LINPVEDNFG  60
   61 RNMLSIDDIT RSVPTGCVPQ LSDVGVDCRK SLCYHLMYRT LDGTCNNLEK PMQGAAFRRF 120
  121 NRHFPAQYDD GKGEPISSLN QSRPSAREAN RVMLSSAQSV VHDKFNNMMM QWGQFMSHDM 180
  181 SKTTLQPSAN CKTCDPVPSK CMPIPIGEKD PNLGFKSKQC LKVSRSAPIC RVEPREQLNE 240
  241 NTAYIDGSMI YGSSLKDLHK FRDGRTGFLR VTRFNNQNVL PFDQSKCANK DKCTASFTAG 300
  301 DIRANLFIGL SSLHIMFARE HNRIAQKLTE LNPTWSGDRV FQEARKIVGA QIQNVLYKEY 360
  361 LPKLLGVSFD KVIGPYKGYD TNVDATIANE FTTSAFRFGH GMIEEFYKRV DLSGNNITHG 420
  421 GFFFGDGVFK SGKILFEGGV DPIIRGFMTT AVKRPHRMTP AITEKMFGST DLGSLNIQRG 480
  481 RDHGIPSYNK MRQFCGLKSA NTFDDFADMI LDRNLRAGLA RNYNTTNDVD FYVGSMLEDP 540
  541 VIGGLVGTTL SCAIGEQFKR ARDGDRFYFE NPGIFTRSQM EEIKKSSLSR IICDNADNFE 600
  601 LVSQDAFLLP GSNLTPCSKI PKMDLSKWRA L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 158.0
Match: 2ikcA
Description: No description for 2ikcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle