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View Structure Prediction Details

Protein: CE05051
Organism: Caenorhabditis elegans
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05051.

Description E-value Query
Range
Subject
Range
gi|157769679 - gi|157769679|ref|XP_001676660.1| Hypothetical protein CBG14590 [Caenorhabditis briggsae AF16]
gi|187027995, gi... - gi|39597990|emb|CAE68682.1| Hypothetical protein CBG14590 [Caenorhabditis briggsae], gi|187027995|em...
361.0 [0..1] [454..1]

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Predicted Domain #1
Region A:
Residues: [1-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRLIFFLA LLFAVNCEDF RACFKRVSRR SIGNYAPIAE YRRTALTMCT QHCIMAAGNG  60
   61 PEGGSICKAF TYELDKQLCR LYDNDGHKIP AVIHPIMGTD IFYRTSDMGE CAGPMSGQHM 120
  121 NPNFVKLNNG KNSLKSSVDK NRNFKISDLP SPTNDQFLQK AKAMSSPMVR MEDMDEVLRS 180
  181 KLRGEESLVP MSQKDTEEGK ELDKTENGPL KCKTSSGYYV VVGNEIVLPI SGGDVQVYNE 240
  241 VEQGDCAKYC SENKGPDGST INCRSLNYFP VEKKCELYGI LAEPHGSGKL LENEKVIYAE 300
  301 KFCLPESPFV CQNDEIFILH VQKTLSKRRR ITTKAASSIT DCLRKCLEQD DCRSSVYISN 360
  361 SKKCEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.39794
Match: 2f83A
Description: No description for 2f83A was found.

Predicted Domain #2
Region A:
Residues: [367-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HNVDVSTGDY ARDSDRETVL IENGCRRKGV TPKRKDSPSL SSILDTSSSE SESSSPSNGG  60
   61 WSECDYKING ETVRVRTNDD GDMETEVC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle