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View Structure Prediction Details

Protein: tag-18
Organism: Caenorhabditis elegans
Length: 201 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-18.

Description E-value Query
Range
Subject
Range
gi|157769271 - gi|157769271|ref|XP_001676456.1| Hypothetical protein CBG14278 [Caenorhabditis briggsae AF16]
gi|39597786, gi|... - gi|39597786|emb|CAE68478.1| Hypothetical protein CBG14278 [Caenorhabditis briggsae], gi|187027791|em...
294.0 [0..1] [201..1]
CE21124 - status:Confirmed UniProt:A5Z2W3 protein_id:CAN99688.1
161.0 [0..10] [185..12]

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Predicted Domain #1
Region A:
Residues: [1-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSDVAFRAR HPGCLPRSRS LERFGNVGTL TRVTSYPNLS TVRVGPNYSS TLHKYRRDYD  60
   61 TLDDSNIDRY TFYTPFYWQT YRFAARRQLY VDPIPHSLGH EYAPFWSRYK WYTDWLNPTY 120
  121 WRRYRDPNYD RPLWNSWRPW QYDTKNVKTA IDLYRNGCID FKTLDKKWIE PTALGRRGKD 180
  181 WSDVYLPAAR YGAHRYFYSF S

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle