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View Structure Prediction Details

Protein: dpy-2
Organism: Caenorhabditis elegans
Length: 380 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpy-2.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
342.0 [0..61] [378..1412]

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Predicted Domain #1
Region A:
Residues: [1-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSQTSGYVD PQTEEYDESR EKSYQVLIAV SGVLSITSLL ILVLFVPSMY NYVDNISRFS  60
   61 RRDFEFCQAS ANDLETEMMS VREGLLRGRN VTKRAAGYGH YNPSMLAADS PQFQECPACC 120
  121 IPGERGPSGD SGLPALPGAP GPDGAPGRPG TTPNASCIPE RVFEPPPCLP CPQGPRGVPG 180
  181 HPGFPGDPGE YGIGGRPGSD GMPGKPGDPG LAGPIGPPGE SGPIGDKGRT PEAHVIPGPP 240
  241 GDSGLPGPWG PPGSAGMPGE DGYAGTPGEK GWPGPPGAPG PGGMPGPNGP TGEQGPSGTP 300
  301 GTCVCQDTEV VMNDEKGRVP APRDNVAPGA TGGSYEPQGG NDAAAPSAIS QSQNDGYGNG 360
  361 ESVSNHKNNG GYYHLRKFTQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.221849
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle