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View Structure Prediction Details

Protein: tre-2
Organism: Caenorhabditis elegans
Length: 585 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tre-2.

Description E-value Query
Range
Subject
Range
gi|39593462, gi|... - gi|39593462|emb|CAE61754.1| Hypothetical protein CBG05710 [Caenorhabditis briggsae], gi|187034782|em...
gi|157756471 - gi|157756471|ref|XP_001670579.1| Hypothetical protein CBG05710 [Caenorhabditis briggsae AF16]
440.0 [0..1] [585..1]

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Predicted Domain #1
Region A:
Residues: [1-585]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPSPVWCDG TLLHAVQLSG LFPDCKTFVD MPLKHDADVT LARWNALMAL APITNDVLAL  60
   61 FLRENFDEPE GELEECAPTD WAPMTDQFGG IIDEDYRRFA AALHAKWPTL YRKISKKVRV 120
  121 NPEKYSIIPV PNPFVVPGGR FREMYYWDSF FTIKGLIASG MLTTVKGMIE NMIYLVETYG 180
  181 FIPNGTRVYY LNRSQPPLLT WCVKAYYEAT GDKQFLSDVL PTLRKEFSFF QTHKTYNHPD 240
  241 WNTPLYRFVV ETSHPRPESY REDLESAEHL DTLEKKCVLW GDLAAAAESG RDFSSRFFAV 300
  301 HGPYAGQLAS TRTSQLIPVD LNSIICGNMK TLSEMYTVCG DLESAKYFDN EYRTLRDTIR 360
  361 QVLWNEEHNC WFDFDVEEGN HATSFHDTNF FPMYCDSYHE DLDSQVVVDY LTTSGAISFP 420
  421 GGIPVSLVNS GEQWDFPNSW PPTTWVLLEG LRKVGQEELA LSLVEKWVQK NFNMWRTSGG 480
  481 RMFEKYNVVS PCFKVKGGGE YVMQEGFGWT NGVILDFLKN YGSKIRWQVA ESCECCDVTL 540
  541 SRTLIKPTSP APSSSSTARL FASELTQTPS VVSLQSMLSD GSVQN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.69897
Match: 2jf4A
Description: No description for 2jf4A was found.

Predicted functions:

Term Confidence Notes
trehalase activity 8.21995956919006 bayes_pls_golite062009
alpha,alpha-trehalase activity 8.15034892377685 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.91663376644963 bayes_pls_golite062009
hydrolase activity 1.70627242352696 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.61226907827219 bayes_pls_golite062009
catalytic activity 1.16285856935495 bayes_pls_golite062009
binding 0.614457867010069 bayes_pls_golite062009
protein binding 0.31260719357226 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle