YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE04859
Organism: Caenorhabditis elegans
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04859.

Description E-value Query
Range
Subject
Range
gi|115251727, gi... - gi|126700290|ref|YP_001089187.1| putative acetyl-CoA acetyltransferase [Clostridium difficile 630], ...
382.0 [0..3] [389..1]

Back

Predicted Domain #1
Region A:
Residues: [1-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDKKVFILS GARTPIGAYR GSFANFGAVE LGTVAAKAAI ERSGVAPEKI EEVIGGCVLP  60
   61 AGLGQNVTRQ ISLSAGLPVT TQAVTVNKVC SSSMKALVTA AVEIKAGYYD TILVVGTENM 120
  121 SQVPFYVPRG EIPFGGIQMT DGISKDGLED IKEKGPMGLC AEKTVKDYGI TREEQDAYAI 180
  181 ESYKKASNAW SSEKFSEEVV PVSVKTSRSE VVITEDEEYK KLIESKVSSL KPVFVRDGTG 240
  241 TITPANASSL NDGAVATVVV GENALPQGAH PLAELVAFAE AGRAPIDFTV APVDAVRLLL 300
  301 KKSGLQVSDI ALWELNEAFA VTVLAFIKEL NIEPSVVNVK GGAVAIGHPL GMSGLRIVNS 360
  361 LAYSLAPGQL GVAAICNGGG EATAVLIKKL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.69897
Match: 2ib7A
Description: No description for 2ib7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle