YRC Public Data Repository - Protein Structure Prediction

Protein:	gst-11
Organism:	Caenorhabditis elegans
Length:	203 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gst-11.

Description	E-value	Query Range	Subject Range
gst-39 - glutathione S-transferase status:Partially_confirmed UniProt:Q9NAB0 protein_id:CAB61107.1	174.0	[0..1]	[202..1]
gi\|39591186, gi\|... - gi\|39591186\|emb\|CAE73239.1\| Hypothetical protein CBG20648 [Caenorhabditis briggsae], gi\|187022944\|em... gi\|157752456 - gi\|157752456\|ref\|XP_001679940.1\| Hypothetical protein CBG20648 [Caenorhabditis briggsae AF16]	173.0	[0..1]	[202..1]
MAAI_RAT - Maleylacetoacetate isomerase OS=Rattus norvegicus GN=Gstz1 PE=1 SV=2	172.0	[0..2]	[203..5]
GSTZ2_ARATH - Glutathione S-transferase Z2 OS=Arabidopsis thaliana GN=GSTZ2 PE=3 SV=1	172.0	[0..2]	[202..11]
gi\|50540032, gi\|... - gi\|50540032\|ref\|NP_001002481.1\| glutathione transferase zeta 1 isoform 2 [Danio rerio], gi\|49903077\|...	171.0	[0..2]	[202..10]
gi\|28932698 - gi\|28932698\|gb\|AAO60042.1\| glutathione S-transferase zeta [Brassica napus]	170.0	[0..2]	[203..8]

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Predicted Domain #1

Region A:
Residues: [1-203]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYKLQYFNM MGRAEPARLI FAYAGVQYTD ERVEKSAWPE IKATTPHGKL PVLYVDGAKL  60
   61 AQSRVIERYL GKVFGLAGET DWETAKMDEL VACVEDFLIE IQPWFKEQDN AKKVEIFKKL 120
  121 IESTIIPFIS AFENILVTNG TGYFVGDKIS YADLAIFHIF WFMNSKILPG ALRKYPKLQE 180
  181 FIEKITAIDS IKSWINSRPK TEA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.39794
Match:	2on5A
Description:	No description for 2on5A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

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Top Sequence Alignment Hits