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View Structure Prediction Details

Protein: CE04785
Organism: Caenorhabditis elegans
Length: 610 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04785.

Description E-value Query
Range
Subject
Range
gi|157756025 - gi|157756025|ref|XP_001670356.1| Hypothetical protein CBG05981 [Caenorhabditis briggsae AF16]
gi|39593685, gi|... - gi|39593685|emb|CAE61977.1| Hypothetical protein CBG05981 [Caenorhabditis briggsae], gi|187034560|em...
522.0 [0..21] [607..99]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVIVSAVVA VGIVISIAGS YGVQKYRIKY VIPPQQEKTF LFPFNQKTDS SSSLRNVVNS  60
   61 HYILNFIHVS NPATNLITFS IEKNGTTILP NQLETIENGI PVVFNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKLTFKYNQL IVGINYFFHA NSSITVVIDS LGSAPNRSSD NLTVVISQGD DQILKIPLKS  60
   61 GSRKYFSFPS ENGTAFSSEK DIDTQIKSIA NSWLDGVNIL VPKEFLERLP KAYLEIMEYA 120
  121 YAYVANSLNF IPSAKLIGQY ENFTVDQTMF FIQSRNEGFT SFDDQVFPLM TLLKLNHI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [285-610]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTLNGDKNKL TNFCNAFPDV FKFQSVFKNY YIPNVSTIIL NSWMSTINEL GYMGNRFSEA  60
   61 GIVLEKIQSP LLFQLVKEAL STQPKIITKD NQFIEKLEYI AENTWKNSIG PGRLLDVKWM 120
  121 GHSRGIFQLE PATKTGESSF ELFCLIGDMC RIMNKVYERV DEYDSKWQQR YLDFEAALPK 180
  181 YWNKELQQYG DLETGKFKPN SSSHALITLS LVNETSEDLT RFLQNIQTDN NFTPLGLQMS 240
  241 EDDGVSVSAN YLLLRSLQFY ALQSSPAQEM SLQMYSILKN NLAAAIARAY RPEKIFYGKF 300
  301 DRNMRPLGAK EALDGALIFA IMSTPM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.69897
Match: 2jf4A
Description: No description for 2jf4A was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.632799902740898 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle