| Protein: | twk-26 |
| Organism: | Caenorhabditis elegans |
| Length: | 519 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-26.
| Description | E-value | Query Range |
Subject Range |
|
|
244.0 | [0..14] | [371..164] |
|
Region A: Residues: [1-446] |
1 11 21 31 41 51
| | | | | |
1 MDVAIKESEI QARSRIIKNH LTERNNCIVL KIDTHMSKVE DMSPFGFHFE FDEKKYKERK 60
61 KQIRKQKITR FFAWLAYYHH KFGIRHVTLI ALLVGYVFLG GFMFEKLESP RELEDLKETI 120
121 VLMQGIIDEE TTDIINVTLS TNGTDRVNKL AKLIKRYYKT MLEAEGRFHG SVWHKAENLD 180
181 MHLMWYFSSA TFYSMTLFST IGYGTISCQT VWGRTLSMIY ASIGLPIMLV VLGDIGEWFQ 240
241 KILTNGYIFL LLKYKKLRKQ PVNRKKNEIL LPMWLALFLV LAYILICTLT IKMFDHNEGN 300
301 KPGIGFFDAF YFTFISLTTI GLGDVMPYNI QYSPFLAAAF LLGLALISIV NTSIYAQLYQ 360
361 MFFNMINSVE DQLDRIHSSN HKGPGYKVFH DMEPVFRMLV CTFPPSHPQT RIKFAAVVRD 420
421 SFRRDKEKKR ESNTSDQIKL RTRTES
|
| Detection Method: |  |
| Confidence: | 56.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [447-519] |
1 11 21 31 41 51
| | | | | |
1 DIPAHDGFHL WMTKRAKKRQ MEQENEDLHA ARRRAPTLGA FGGFDMNLFK RGRSNTSPFE 60
61 KNDSEETEES DVE
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
