| Protein: | CE04656 |
| Organism: | Caenorhabditis elegans |
| Length: | 569 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04656.
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..1] | [568..95] |
|
Region A: Residues: [1-430] |
1 11 21 31 41 51
| | | | | |
1 MVTSRYLITV TTVVLGGSAQ FYSYGVVNPA QVVITDWINQ TYIDRYKAPL SLTVSNVIWS 60
61 FVVSSIAIGA ILGASFTRII GEKYGRRNGM FFNGILNVFA ALFELVAKRF SSPELLIFGR 120
121 FVYGINMGLS SGLVPMYLME ITPYKYRGPA GTLHQIAVAF SDWFSLLIGL PEVLGDQNNW 180
181 PLAFALPGLP ALALVCILPF CPESPKYTLG TKHDRDKALK DVELLIGKEQ APHMFESIVR 240
241 EVALDEVSFF CVYLYTRISL LGLYLNFANH LATTKFWKKN VIHTALKLKL LSSKLRGNAK 300
301 LHGYFQGDGT FRELFTRPDL RIPLAVSIIV MIAQQFTGCT AVFAFSTDMF LNAGLTPVIA 360
361 RFSTLAIGIV YFLFACTSPF LIHKVGRRWL SLFQLASCMV ALMLLSLFTF LQNYENIEWA 420
421 RYGTIFSLVF
|
| Detection Method: |  |
| Confidence: | 11.154902 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glycerol transmembrane transporter activity | 7.11654923455995 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 6.7545566917184 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 6.7545566917184 | bayes_pls_golite062009 |
| glycerol-3-phosphate transmembrane transporter activity | 5.74077413704789 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 2.62141276633776 | bayes_pls_golite062009 |
| sugar transmembrane transporter activity | 2.47557586092261 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| solute:hydrogen symporter activity | 2.10485633822652 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| monosaccharide transmembrane transporter activity | 1.6904339767429 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.46605775041083 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
|
Region A: Residues: [431-569] |
1 11 21 31 41 51
| | | | | |
1 YMCVYGVGSP IPWIIASELF TQQFRATAVT VSVFVAWTFA FIVSTSYLPF QQLVGITFSY 60
61 FPFIIGLAVF GIFIYVLLPE TRDRPMVEIV TEVHHRTASL SAGRPWDASR PPSRQEVQRL 120
121 LDTMDPRSYS SYDNSTLED
|
| Detection Method: | |
| Confidence: | 1.31 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
