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View Structure Prediction Details

Protein: CE04481
Organism: Caenorhabditis elegans
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04481.

Description E-value Query
Range
Subject
Range
gi|50733008 - gi|50733008|ref|XP_418867.1| PREDICTED: similar to Chromosome 7 open reading frame 25 [Gallus gallus...
516.0 [0..4] [403..81]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGVDEDDLE RQRIEKIKEV QEAVAKLTGA KFQKLENLQR MERMLNKEIE LLQNATRKAL  60
   61 ETHLVTCNYA FYKSIIDEVE EMENATAVLK TFKRD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVSVTVDIVM KEPNVWIKLV NRPAKTVLIE YRDGKRNGDV IAQIKQHLFV SRRFNRPQIR  60
   61 IYFRNGVLAE MAQKLIRHGI VVIGEHVDKS DPSLRGKWNE ELIERLGEEE DSDWDEVDED 120
  121 AASIPTLPSS QSQSESTLPR LNLDISAVML LVSNMCEPGG VNYQFK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [262-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEMINKHVEC ERLKPAKAEV LEKLKGHHLI MCELAYRRVA EIVKNVGGPT EKKRFEELSK  60
   61 TIERVQDQPS DEIGRVVKLR NIKGITSITK RVFSCAEVTK TTTVTANQKF LTHSRAKHIY 120
  121 FDVIEIPPRP LTEQKEATAK VI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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