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View Structure Prediction Details

Protein: nol-10
Organism: Caenorhabditis elegans
Length: 754 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nol-10.

Description E-value Query
Range
Subject
Range
gi|17225208 - gi|17225208|gb|AAL37300.1|AF323584_1 beta transducin-like protein HET-E2C*40 [Podospora anserina]
401.0 [0..2] [429..900]

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Predicted Domain #1
Region A:
Residues: [1-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSTVNDVK IYNLSAGKSL PEWMSSRTRR KLEQRNTDVR QRIQLIQDFE MPDVSNTVNI  60
   61 TPDGKYVWAS GNYKPWLRCY DLNNLSLKFE RGLDADVIKL IPLSDDYSKV VILEEERWIE 120
  121 MHAMLGRYFR MRMPCQGRDM ALSEESSDLY LVGSKSEVYR FNLEQGCWLT PFESTAPLNC 180
  181 VQVCTEHQLI CCGTTNGVVE AWDHRDKSLC GTLDAGSSVN SHIGENQKVA VTSVAFSDPL 240
  241 HIGVGTSTGQ ILIYDLRARR PLLIKDHNNE LPINKLDFIK RDDGDVVASM DSRMMKLWHE 300
  301 EDGSPMAAIE NTCPLNDFCR FPNSGMFFFA NEAPKMLQYF IPQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.045757
Match: 2gnqA
Description: No description for 2gnqA was found.

Predicted Domain #2
Region A:
Residues: [344-754]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGPAPKWCSY LENLTEEMEE TETTVYDNYR FVTKKQLDDL GLSGLIGTNV LRAYMHGYFI  60
   61 DARLYNKAQT QMQPFAYEKY KDEKIKSMIA DEREESAVKK KVEKLPAVNK ALAARLRDEA 120
  121 SAANQKAETK KEKKKSKKSD AATSLLADDR FKKLFESEDF EVDETSEQFL KNASIAQKMK 180
  181 AKGPVEVESE GEESEDNDAS DSENEASGSD SEPKGSASWM VEENREVDMA SDLESASSDE 240
  241 DIDQSLKAKR AKVRAAKKSE RNIQKSQKYD ERKEAKKIRK EQRQLSKPSK FVLHSIGTGE 300
  301 TTRKFVDETV AVRDDADNKD SMALGARKRA TARSDRKTKK VNDDDVPFGG REMTFTISKR 360
  361 DKDLRAEAAK TKQAAHAAER KEVSRRPNAL VTKGLKKLPG NVNVGKRQNT F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle