| Protein: | unc-18 |
| Organism: | Caenorhabditis elegans |
| Length: | 673 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-18.
| Description | E-value | Query Range |
Subject Range |
|
|
573.0 | [0..85] | [673..3] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MQNVKHSYLA CSSSSCCQFF SLFLSLCHAE HQIQTLSPSF AYTLLIFALL VSDKSEIALL 60
61 SRHTHTYIFL PISSVHPSL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [80-673] |
1 11 21 31 41 51
| | | | | |
1 ELLPFVVFMH MRKLLNDVIR PLKKGDGRSA WNVLIVDTLA MRMLSSCCKM HNIMEEGITI 60
61 VEDLNKRREP LPTLEAIYLI APTAESIDKL IQDYCARNLY KCAHVFFTEA CSDQLFSTLS 120
121 KSAAARFIKT LKEINIAFTP YESQVFNLDS PDTFFLYYNA QKQGGLTSNL ERIAEQIATV 180
181 CATLGEYPSL RYRADFERNV ELGHLVEQKL DAYKADDPSM GEGADKARSQ LIIIDRGYDA 240
241 ITPLLHELTL QAMCYDLLGI ENDVYKYETG GSDENLEKEV LLDENDDLWV EMRHKHIAVV 300
301 SQEVTKNLKK FSESKGNKGT MDSKSIKDLS MLIKRMPQHK KELNKFSTHI SLAEECMKQY 360
361 QQGVDKLCKV EQDLSTGIDA EGERVRDAMK LMVPLLIDPA VRCEDRLRLI LLYILSKNGI 420
421 TDENLNKLLQ HANISMADKE TITNAAYLGL NIVTDTGRKK TWTPTKKERP HEQVYQSSRW 480
481 VPVIKDIIED AIDERLDTKH FPFLAGRQVN QGYRAPASAR YGQWHKERGQ QSNYRSGPRL 540
541 IIYIIGGVTF SEMRACYEVT AARKPWEVVI GSDRIITPDK FLTNLRDLNK PRDI
|
| Detection Method: | |
| Confidence: | 159.0 |
| Match: | 1dn1A |
| Description: | Neuronal Sec1, NSec1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNARE binding | 4.56428593085019 | bayes_pls_golite062009 |
| syntaxin binding | 3.46044132736061 | bayes_pls_golite062009 |
| binding | 2.7837022903231 | bayes_pls_golite062009 |
| protein binding | 2.77285532000616 | bayes_pls_golite062009 |
| syntaxin-1 binding | 0.269372794919901 | bayes_pls_golite062009 |
