| Protein: | czw-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 778 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for czw-1.
| Description | E-value | Query Range |
Subject Range |
|
|
768.0 | [0..2] | [778..18] |
|
Region A: Residues: [1-246] |
1 11 21 31 41 51
| | | | | |
1 MASSEGSYRD LEKKLKNGLT SISQDIVDKY GNLKVSLNVN ATAKLIFDRL ENLEDIAEMS 60
61 TRNLSNLIDQ TAKDSPEMLA EIKSQAQSCE NLVEFLQSMK NVEEQLIIMR SKTTNRVEWG 120
121 TAILACKDFL NDTNMLLEGI GRDGFDMSVP LKHFAAEYSV LSYNCRYQLS ADYERAMNVP 180
181 KLSKQKCGDR TNVSFSVFNV GSVEDQKMLN ETLSAMNMIG QLPERLDAWK IVILNVFCEA 240
241 IVASRD
|
| Detection Method: |  |
| Confidence: | 0.974 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [247-455] |
1 11 21 31 41 51
| | | | | |
1 GVDVYIVDNP TPDQTRFLIN QKPRGKKDKT IDVAKVLESM EVFFTKLHSV LHSHELLDAT 60
61 GKTFTSMIGS VIEEQLITMI LKDVIAIAAP VTETADEDQE MFINLLQIGE VFVERMKELG 120
121 FFSQKAKLLF TLDTDTIFVT RRCFAIVSKA NKLINETYDK LVTVGVDDSA IKDIDLLAKA 180
181 HTHAEHFAKE YGKDLGRLWS HNEDSQFPS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [456-591] |
1 11 21 31 41 51
| | | | | |
1 FFAFQKCTVS ESTINFVNLL RDNVKAAFAC EDEGARAKLA LTAENIVRLY VILTPRKHAE 60
61 LFSSIPNMAA IFYNNCHYIS HCIMTMSFEA SGDNQKTLLE PLLLDSVIRL RTVAADCMEK 120
121 TLTRCRREMT AYLEDH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [592-650] |
1 11 21 31 41 51
| | | | | |
1 SIFEHLPASY KTTKNTFAAA EEMSESADIL VPREEPKIIK CLAACLLHIR LIAKNLREP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [651-778] |
1 11 21 31 41 51
| | | | | |
1 LTEVVYCKVI GSLVSFLLDS LVRHVVTTSD FRENDANVMA DVFKRLLEVV ANIVAYKEQT 60
61 KVTDFCAREY FRLNEIVFVL GNRMQDIEHR WFNAKGPMAE HLSRSEVVGL IKALFADSQH 120
121 RSDLIARL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
