| Protein: | CE04398 |
| Organism: | Caenorhabditis elegans |
| Length: | 434 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04398.
| Description | E-value | Query Range |
Subject Range |
|
|
321.0 | [0..6] | [428..250] |
|
Region A: Residues: [1-434] |
1 11 21 31 41 51
| | | | | |
1 MVIINRSNTY AVEQEAFPRD KYNIVYWLVI LVGFGVLLPW NMFITIAPEY YVNYWFKPDG 60
61 VETWYSKEFM GSLTIASQLP NASINVFNLF LIIAGPLIYR VFAPVCFNIV NLTIILILVI 120
121 VLEPTEDSMS WFFWVTLGMA TSINFSNGLY ENSVYGVFAD FPHTYIGALL IGNNICGLLI 180
181 TVVKIGVTYF LNDEPKLVAI VYFGISLVIL LVCAIALFFI TKQDFYHYHH QKGMEIREKA 240
241 ETDRPSPSIL WTTFTNCYGQ LFNVWFCFAV TLTIFPVMMT VTTRGDSGFL NKIMSENDEI 300
301 YTLLTSFLVF NLFAAIGSIV ASKIHWPTPR YLKFAIILRA LFIPFFFFCN YRVQTRAYPV 360
361 FFESTDIFVI GGIAMSFSHG YLSALAMGYT PNVVPSHYSR FAAQLSVCTL MVGLLTGGLW 420
421 AVVIEHFVDK PSIL
|
| Detection Method: |  |
| Confidence: | 1.52 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 3.82096685159505 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.34396155292818 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.32643461660963 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.2506965512085 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.02370427376594 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.62538016506437 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.46819549608723 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 0.869150152038001 | bayes_pls_golite062009 |
| binding | 0.829924243430409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.222664452597504 | bayes_pls_golite062009 |
