| Protein: | CE04349 |
| Organism: | Caenorhabditis elegans |
| Length: | 654 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04349.
| Description | E-value | Query Range |
Subject Range |
|
|
517.0 | [0..26] | [653..26] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MSLALKLFPL FLFLLLLLPI DSIPIIKSLL NPSTPHANSQ AYVETSDVTS QFTIYASNIS 60
61 SCLFKTAVIP CECFLQVSND YRLEENGKLL SKFAVSPPDI KIFTPSTHEM LNELTVHILP 120
121 KLCREDLSDI QLEYRSFQVF PG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [143-520] |
1 11 21 31 41 51
| | | | | |
1 EEESSWKTVS AVAKTLKDTK TSLIFGCKHF SDPGYYRVSI RLSLVNYTVQ ADKWIVVNRT 60
61 NQNALRLRED SIFPHCSSDY TVGWSLAECS MEHLHYRLRI LAVPEGAKNH DDGAVYIEEI 120
121 GIAPDMHHLK ISCSQFDIIH EKYCFELVSV NRNSSVSHTW HSVCVSTEPV ERKLGGWSAW 180
181 SEWSACSETC GSGRQRRVRF CNEPVPKRSK YCDGPLIETQ ECTLTKCPEA MMPQSLSTNC 240
241 SCGCALSLEA SSFFASSRHS RMCEGNQTWT LPKMDGFKIA DFTIRKQGDA KGKLFFFLRA 300
301 PYQELVWSSD SHQEYQFSLP MSAPIFVVLW SKSNDTARLK QIDDGFTVSY SVRDADSSPT 360
361 VAKIDSCQPF CPETMAIA
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 1w0rA |
| Description: | Solution structure of dimeric form of properdin by X-ray solution scattering and analytical ultracentrifugation |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [521-654] |
1 11 21 31 41 51
| | | | | |
1 IMAIIFICII FIPPLVCAAV TASMRRNTSP EVPLMDNKYD SEMIRSGNTE STHVSSRNYV 60
61 AKRSIGIQLS VQSTPRTARA CLSHESPVPP RGQSSLSECD ELEYDYYDGT TFPGSFLAPV 120
121 QDVMYSQIDI DQVK
|
| Detection Method: | |
| Confidence: | 0.958 |
| Match: | 1fazA |
| Description: | Prokaryotic phospholipase A2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.253768189456285 | bayes_pls_golite062009 |
