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View Structure Prediction Details

Protein: CE04331
Organism: Caenorhabditis elegans
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04331.

Description E-value Query
Range
Subject
Range
gi|157767166 - gi|157767166|ref|XP_001667063.1| Hypothetical protein CBG16370 [Caenorhabditis briggsae AF16]
gi|187026529, gi... - gi|39596335|emb|CAE69973.1| Hypothetical protein CBG16370 [Caenorhabditis briggsae], gi|187026529|em...
176.0 [0..36] [152..25]
CE09715 - status:Confirmed UniProt:P91284 protein_id:AAB37655.1
113.0 [0..78] [168..39]
Ctr1C-PA - The gene Copper transporter 1C is referred to in FlyBase by the symbol Dmel\Ctr1C (CG15551, FBgn0062...
94.0 [0..77] [145..2]
gi|118793568, gi... - gi|118793568|ref|XP_320931.3| ENSANGP00000017579 [Anopheles gambiae str. PEST], gi|116115872|gb|EAA0...
78.0 [0..49] [152..3]
gi|108870219, gi... - gi|157135470|ref|XP_001663456.1| high-affinity copper uptake protein [Aedes aegypti], gi|108870219|g...
59.0 [0..113] [152..60]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVLKSVCKT LFLVDFQNNE CQKLRNRHFL TTLQEKQIEN ALSEIVGDQP PHDLTLNHKE  60
   61 ESLYDMLVAS VRAGRESHFE LDQLDVHTET NQSGHDHHIH NNEEHKHHNM RSHDHHTMKM 120
  121 WFHWGFDEVV LFDFWRIDDK NALAVILGAG FGHWIFAVLH FANPNGEAAD SIATDACH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 55.69897
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle