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View Structure Prediction Details

Protein: CE04248
Organism: Caenorhabditis elegans
Length: 479 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04248.

Description E-value Query
Range
Subject
Range
gi|116309769 - gi|116309769|emb|CAH66811.1| OSIGBa0135C13.6 [Oryza sativa (indica cultivar-group)]
503.0 [0..4] [471..37]

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Predicted Domain #1
Region A:
Residues: [1-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPTKFPKN FQLATATAAY QIEGAKNLDG RGFSTWDSIR SENGRIHDNS DPDLSCEGRL  60
   61 KYKEDVALLS KIGVTSYRFS ISWSRILPDG TLKTINEDGI QFYRDICLLL RDNGIEPIVT 120
  121 LFHFDMPLSI YDNGTSWLNK ENCEHFEKFA DLCFQKFGDL VKTWITFNEI NMQAWSSVVK 180
  181 IEGELWLCPD RPEIENHEQA PYIAATNMLL THAKIYRNYQ KNYKETQNGL IGITNGGRFC 240
  241 LPASDSPADL DACNRALDWL FNYTIEPILT DSGDFPASMR EKLPFLPKFS EEEKKLIKGS 300
  301 TDFLGINYYL SHIVRNLNDG EEPASQSERD AAYAFNEGKW EKICGETWVR YAPDGLFGLL 360
  361 KYVRDKYNNI PVFITENGCM DLVGGEGRKE EEILDDKHRI KFISGHLEAV AKALEEGCNV 420
  421 IGYTLWTLMD NFEWDDGFGV KFGICRVDFD SPDKTRTMKY SAKYYQTFIR EFKKHHNLL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 128.0
Match: 2dgaA
Description: No description for 2dgaA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle