| Protein: | CE04239 |
| Organism: | Caenorhabditis elegans |
| Length: | 381 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04239.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..8] | [381..94] |
|
Region A: Residues: [1-381] |
1 11 21 31 41 51
| | | | | |
1 MNTSFVEPLY ADVEQLEPVP LLRHSYQLTV LYTVAYGAVF FTGVLGNTFV VLAVWAHKNL 60
61 NITTDYLILS LALADLFILW ICLPTTLINS IFTEWLWGQF FCRLSTWANA STSFASVYTL 120
121 VAVTADRYLA ICHTLKYNTS WDREYTKYVI FAVWLVAAIF GIPNWYNYDL IVWQEGSYGY 180
181 RLCTSQTDQK LYFLFVNLLL AFIVPFGLIS GLYTRIFITV STHRSLAVDA RAREDRVKLR 240
241 VATMMLTVII VFACCWLPLY CIFTYFFFFA DQRSDLFQIT SMLIRPIFQW MSLLSSSLNP 300
301 IIYIAYSHKY RRAFKSILLM PCKTRYERVR STILRRHSRG FKSTATISMS NFGTEPTNLG 360
361 GASSLLIELD GKQVERSTSD C
|
| Detection Method: |  |
| Confidence: | 43.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
