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View Structure Prediction Details

Protein: CE04159
Organism: Caenorhabditis elegans
Length: 288 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04159.

Description E-value Query
Range
Subject
Range
gi|74184363 - gi|74184363|dbj|BAE25714.1| unnamed protein product [Mus musculus]
272.0 [0..14] [271..530]
gi|310204 - gi|310204|gb|AAA50568.1| receptor-linked protein tyrosine phosphatase
272.0 [0..14] [271..922]

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Predicted Domain #1
Region A:
Residues: [1-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKKQVWGKK IIFRYYNKLI VQFVQTTLEK GPIGLRNEFN AMKRFNDFDK MQSFKKAQDH  60
   61 HKNRYKDVGC LDNNRVKLAH PPWPHDYIHA NFVSTPANAK RFICAQAPLD NTCADFWYMC 120
  121 LQERVEAIFM LCNLMEKGAK KCSEYYATKE KPELVFHEKD QKITVKYEAS GTVKFVKPTK 180
  181 AVVKETVLII EGPGGPIAVH CSAGIGRTGS VVMIEYMCEQ LLNGNQIEET DKILQKIREQ 240
  241 RNNSIQTDHQ YLFVHQVMMN FFLEKKLFDE EVKKAHADFT HKYEKCVH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.30103
Match: 2fh7A
Description: Crystal structure of the phosphatase domains of human PTP SIGMA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle