| Protein: | sec-10 |
| Organism: | Caenorhabditis elegans |
| Length: | 659 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec-10.
| Description | E-value | Query Range |
Subject Range |
|
|
568.0 | [0..2] | [658..45] |
|
Region A: Residues: [1-323] |
1 11 21 31 41 51
| | | | | |
1 MRFEEEIGSL QMLCDQFQNK INTLEKQMNE EKKDYVQKLH RLHEKNGEAI DKMKQLDHTM 60
61 QAVSTKVVHL GDQLESVDQP RSRAHDAHQL MQHFDEFLSD QPLNSMIFTD PDKLLESADL 120
121 VHKLYSISQE LNKDKFANVQ ARIGQRYKVV EDLLIEEFVR SQRDEKKMAE VAKILSEFKG 180
181 YSGCVDRYVD FLCQSIHPRG DGGEILADCL QLCRTQQPRI SAIFPSPHTV MQKLVLNIFT 240
241 GRMKETITAR LRECKDTDDQ EHYLRDLAYL YSSTLKMCKE LEKLHISPDS AFLSTLTDSI 300
301 FQRYIATYCS EELKYLNDQC SNL
|
| Detection Method: |  |
| Confidence: | 11.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [324-659] |
1 11 21 31 41 51
| | | | | |
1 LQRFYESKKH VKKQIGGGLH ELKRDVAARL MNVETYGGET FVAEDVAISI LQETKNAFGR 60
61 ANQLCDKEEL PRHVENIVDV LLKYLYGEHL DYAVETGLAG ISLAESKTEP PAYFFSVVAK 120
121 CTSVILLMIK QFEDPIFPII KETIVEPSVA KKWQQSLRSL ESKMSLGLER QLNSIVGYVK 180
181 FLFSEQKKTD FRPDSQQIDI RVSPQCQLAS RFLANQVAAM ELGCDGENLE ALQSDLATRL 240
241 FKFMLTHIQQ FTYNSTGAVL LLCDVGELRT LVSKWRVQNA LTQWESLQAL TNLLAVLPDQ 300
301 VNETAHSSLL ENVDRQLIHD FVRLRTDFRS IKNFQI
|
| Detection Method: | |
| Confidence: | 1.6 |
| Match: | 2fji1 |
| Description: | No description for 2fji1 was found. |
