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View Structure Prediction Details

Protein: ins-7
Organism: Caenorhabditis elegans
Length: 105 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ins-7.

Description E-value Query
Range
Subject
Range
ins-8 - status:Predicted UniProt:Q7YTH4 protein_id:CAE18046.2
125.0 [0..1] [105..1]
gi|39597006, gi|... - gi|39597006|emb|CAE59233.1| Hypothetical protein CBG02554 [Caenorhabditis briggsae], gi|187037316|em...
gi|157751890 - gi|157751890|ref|XP_001679657.1| Hypothetical protein CBG02554 [Caenorhabditis briggsae AF16]
116.0 [0..4] [105..2]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPIILVFFL VLIPASQQYP FSLESLNDQI INEEVIEYML ENSIRSSRTR RVPDEKKIYR  60
   61 CGRRIHSYVF AVCGKACESN TEVNIASKCC REECTDDFIR KQCCP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.53
Match: 3lriA
Description: Insulin-like growth factor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.09929730908395 bayes_pls_golite062009
protein binding 1.05602111690929 bayes_pls_golite062009
receptor binding 0.812490884654988 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle