YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE03845
Organism: Caenorhabditis elegans
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03845.

Description E-value Query
Range
Subject
Range
gi|113731539, gi... - gi|167644271|ref|YP_001681934.1| alpha/beta hydrolase fold [Caulobacter sp. K31], gi|167346701|gb|AB...
199.0 [0..2] [281..62]

Back

Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDNLQMVV VQAQNCGVLH VYVQGNLEER GGKTIILTVH DIGTNHKSFV RFVNHPSMAT  60
   61 VKEKAIFLHV CVPGQEDNSA DFFGDFPTLD GIGDDLSAVL DKFEVKSAIA FGEGVGANII 120
  121 CRFAMGHPNR IMGIVLVHCT STTAGIIEYC KEKVMNMRLE NSIMSDGAWD YLLAHKFGGE 180
  181 SKSRQEYLEE LKATLNPKNL SKYLVAFTKR TDLSSTIGTK LETVDALLVT GSKASHLHTV 240
  241 YTTHKSMNKK KTTLLVVDNV ADVMQEAPDK LARSLILLCK GCGVLSGVAI PGMERQRTLS 300
  301 SSMEEADRPR RMSVTQPHLP PVPSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 1a8sA
Description: CHLOROPEROXIDASE F/PROPIONATE COMPLEX
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on ester bonds 0.497892985527101 bayes_pls_golite062009
hydrolase activity 0.175922778894906 bayes_pls_golite062009
binding 0.140475020321353 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle