| Protein: | npr-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 444 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for npr-9.
| Description | E-value | Query Range |
Subject Range |
|
|
283.0 | [0..20] | [361..1] |
|
Region A: Residues: [1-444] |
1 11 21 31 41 51
| | | | | |
1 MSLGNVIIAS SVNTRSPIDS HLFRKILCFR IYDDTISFER KIGIIIPTIF AVIILVGLVG 60
61 NALVVIVAFG RQMRNSTNTL IIGLAISDLM FLLLCVPFTA VDYAAPTWIF PEWTCSMINF 120
121 FQHTSAYCSV WTLTLMALDR YLAVVYPVES MTLRTPRNTV IALCFIYIII IASQIPVGRM 180
181 HGIYVYDFIM EKRSTCAILT IATAEATPTM ARTYFMTFNV FGYVLPLGIS VVLYGLMLRK 240
241 LWDMPRPGNS QSVGGRNLTN RDSGSSIRRR PEATAAKRKV TRLVLCVLIT WALCWLPLNV 300
301 CFFMSGLAYP EPLVISHGVI MVIVQIASQV LAYTNSCLNP ILYALMSQSF REGFIRVMKM 360
361 LINKLSRGRF CTNYRRSALR TELTHYNQTP AHPANTVVQV SNGERSSLLK DNSSSATSVQ 420
421 PLRTSIQAKK TKNVCDTMLF VCFF
|
| Detection Method: |  |
| Confidence: | 46.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
