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View Structure Prediction Details

Protein: clc-4
Organism: Caenorhabditis elegans
Length: 194 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clc-4.

Description E-value Query
Range
Subject
Range
gi|187025736, gi... - gi|39594955|emb|CAE70823.1| Hypothetical protein CBG17594 [Caenorhabditis briggsae], gi|187025736|em...
gi|157768642 - gi|157768642|ref|XP_001676142.1| Hypothetical protein CBG17594 [Caenorhabditis briggsae AF16]
280.0 [0..1] [194..1]
clc-1 - status:Confirmed UniProt:Q93198 protein_id:CAB01719.1
231.0 [0..1] [192..1]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSSLTQLVF GVVMLGAIAL TLGATFSDKW RTVEKDLLDL YEDVQRNHTE RLTGILPFLC  60
   61 EDGAVGCAGF WKEMKPYEKI VAICMIAALI LEIVAFVWNF LTSCTCCFKK YLLHPLSPLS 120
  121 FLITIFLTVA IGVFYYNSDE IKDDVNIQKI WDAEAKDLNI NIGSAFWMAV GAWCLVVIDT 180
  181 ILASFAIFFA QHGV

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle