| Protein: | col-122 |
| Organism: | Caenorhabditis elegans |
| Length: | 300 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for col-122.
| Description | E-value | Query Range |
Subject Range |
|
|
240.0 | [0..43] | [299..1533] |
|
|
198.0 | [0..49] | [299..345] |
|
|
185.0 | [0..51] | [299..1866] |
|
|
174.0 | [0..33] | [299..229] |
|
|
163.0 | [0..41] | [298..253] |
|
|
162.0 | [0..69] | [299..887] |
|
|
151.0 | [0..41] | [298..238] |
|
|
148.0 | [0..36] | [299..49] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MEDNKIKAYR LIGYAAVSLS AVGILSVCIT LPLVYSYVSN LRSQMHSELR HCRDTVNTVY 60
61 ATAVAMPALP G
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [72-300] |
1 11 21 31 41 51
| | | | | |
1 RGNRTARQAG YDVAVQDAPA QEHNSCDGCC LPGAAGSVGA AGRPGTPGRP GAPGAPGHPG 60
61 KPPQSPCEPL TPPPCPACPP GPPGAPGAPG KPGSEGPPGP PGHDGPNGGP GQPGQPGPHG 120
121 PNGHPGKPGS QGPPGPPGHS DEPKPGQPGQ PGRAGPRGPR GVAGIKGKDG APGSPGQPGP 180
181 RGGPGEPGQD GAPGQPGLPG SDGTPGEKGI CPKYCAIDGG VFFEDGSRR
|
| Detection Method: | |
| Confidence: | 24.0 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
