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View Structure Prediction Details

Protein: sfxn-1.5
Organism: Caenorhabditis elegans
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sfxn-1.5.

Description E-value Query
Range
Subject
Range
gi|213624326, gi... - gi|89267480|emb|CAJ83464.1| Sideroflexin 1 [Xenopus tropicalis], gi|62858971|ref|NP_001016244.1| sid...
513.0 [0..4] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELVKTLVL RPDISKPKWD QSTFEGRAKH FFAITNPLNL FHGEKQLDEF KKIVEDYRKG  60
   61 SVSNDLTLNQ LWKAKHVVDS AFHPSTGEKM MMVGRMSAQV PMNMAITGGM LTFYKSPMAV 120
  121 IFWQWLNQSF NAVVNYTN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSGDGGSVSQ LLVSYCAATG GALTAALGLN SLVKKAPPLV GRLVPFVAVC VANSINIPMM  60
   61 RRGELTEGID ILDENGQVIG QSPGVAQSAI SQVVVSRIFM AVPSFAFIPV VVNALEKRPY 120
  121 FKANPKMFLP LQTILCGLVL SVSTPVGCAL FPQLTPVSFD QIEPELAQKI KNLPNPPKQL 180
  181 YCNKGL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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