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View Structure Prediction Details

Protein: CE03598
Organism: Caenorhabditis elegans
Length: 486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03598.

Description E-value Query
Range
Subject
Range
gi|157750712 - gi|157750712|ref|XP_001679068.1| Hypothetical protein CBG03297 [Caenorhabditis briggsae AF16]
gi|187036725, gi... - gi|39597595|emb|CAE59825.1| Hypothetical protein CBG03297 [Caenorhabditis briggsae], gi|187036725|em...
947.0 [0..1] [484..1]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVTILGNNL TARHFVKYLG NCHQSVQLSL WTFDDSEYPE FENVSTCLRY HGMKNLPNAL  60
   61 LAADVVVNLH ECTDFSLLPD VAKLQMHNVE VVRSVLFHCN SPLVHLSTPF LQCSHRWPNV 120
  121 YEPERDPVVF KPQWPFPEYC ASKFEAEKLV KSAPNDCYIV RCVPTYGEGD DCSILTDLIY 180
  181 FSNDKTILFL GDDDGHMQMA YAGNAAVAIW SAVCRLLSQS TSLNLNESFE EELGDLLTSA 240
  241 ESSFRFHQES ERVFEKSKLE LYAIKEEDEN LEGYRARHNT VRTSIDVDSE SKTDIDENLT 300
  301 EEGEVFEQGD CTKQGFNFEI EDEPQSQNLD FSIIND

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.06
Match: 2hunA
Description: No description for 2hunA was found.

Predicted Domain #2
Region A:
Residues: [337-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKFSKNDRVF EIFLINDETP KKTVYSTYGQ LLYTGKRLRS AVQLSFIPLY YIYLLFCMVL  60
   61 QFTMKLFGPL KFASLLPSPA FLYFYFHHWT FFNATKSLLM LGYKPNFEFK ECVNNCVKHY 120
  121 REFRKKDVRL FSWQNSLTGN PKSFNLDIVH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle