| Protein: | pro-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 529 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pro-1.
| Description | E-value | Query Range |
Subject Range |
|
|
546.0 | [0..1] | [528..1207] |
|
Region A: Residues: [1-529] |
1 11 21 31 41 51
| | | | | |
1 MAYLGVDTSR IAGTQPLEML LVSSGSPDPH STIIIDPRTG VSSWSYKGSE LQGASTGLVE 60
61 PLGHDGEHVV ITTKERPLVH VLAVHPKDRF HQKCVLPGPV SAIVSDNSGH FVFMSIKRQL 120
121 YCWLLSTGEL LSVIDAHYQN ITKIVISDDD SMIFTASKDG AVHGYLVTDL VSADRDHTVA 180
181 PFRKWASHTL SISDLKITNG SNPRVLSAGA DHIACLHSIS MDSVILKASS DRPLTACAID 240
241 PAETRIFIGT EVGNIAQINL FQLAPEERDL LVQAGDEHNT KFRVLNGHSD EISRLAINTD 300
301 GTLLASGDAS GKYCIWEISS HQCLKVSTMR SVINTLRFIP FWKTISGGEH VAKFRPVWDL 360
361 KREPTKCDRF AIEVSTEFNS DQKHWNDVIE ETIDQLLLES GSKSSAQLQW DAEGPARNEA 420
421 AKAEKAAENT IKNIITLGDD EDDAPEVGNQ RRKSGKKNKK NRKNQKKNDF EAAVIEKKQV 480
481 EPIVIDDEEE VNSSLQKKFD ALKAENEKLK EINKQMYEFV AKEIVDSEK
|
| Detection Method: |  |
| Confidence: | 50.69897 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.887599328827258 | bayes_pls_golite062009 |
| protein binding | 0.400495177398246 | bayes_pls_golite062009 |
| snoRNA binding | 0.355774735269231 | bayes_pls_golite062009 |
| RNA binding | 0.10947516858053 | bayes_pls_golite062009 |
