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View Structure Prediction Details

Protein: CE03542
Organism: Caenorhabditis elegans
Length: 432 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03542.

Description E-value Query
Range
Subject
Range
gi|23092863, gi|... - gi|24656434|ref|NP_647768.2| CG1869-PA [Drosophila melanogaster], gi|23092863|gb|AAF47714.2| CG1869-...
348.0 [0..65] [420..113]

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Predicted Domain #1
Region A:
Residues: [1-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSSDDVSL FYYDKKASED VRSLKQILKH FLIIYTVLIA CGVFAYAITS LLFHLNHNPT  60
   61 TLDKAMPTEH PDCNKRIIGY YSENETTDIT KRQLSQLTHA IFAFIKLQPD GTLQFQSGSA 120
  121 KQRFLILKTN AESSTLKVMI SIGGMDINSD FSLVISDEKK RRSLIESIVS FLTEHQIDGV 180
  181 DIFWKWSSSR DKFNFSVFMR DLREKLDKQL KSYIVSILLP PAGVDIWEMG YDLDEIIDHI 240
  241 DFMNVYSMDY SGPWDNKWGT PTGPSAPMNY NIGPRKHFTV DWTMKYYACK TRQPNKFNIV 300
  301 IPFYARIWRS VGEAITLKTE VFRNAKLING KADGDPYISR LSVKQKGIEL FPYSWDNATK 360
  361 SSYIWKPKEK TFLTFENERS IEKKLQYVNE MNLGGVWIWS VDMDDRINTL LDAVSSDKFC 420
  421 SSSSANSINF KF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.154902
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.00445818053203 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle