| Protein: | atf-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 401 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atf-2.
| Description | E-value | Query Range |
Subject Range |
|
|
159.0 | [0..80] | [400..85] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MDVDSASLSP SSRLSVVCSA SAEFSSSSSD SSNFSEGSPP ESRRNSVNES VIKDEHYWER 60
61 RRRNNDASRR SREKRRQNDL AMEEKIMLLS AENERLKSQL GTTPIPQPSV TEPPTSLIIP 120
121 QVA
|
| Detection Method: |  |
| Confidence: | 2.68 |
| Match: | 1hjbA |
| Description: | C/ebp beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [124-319] |
1 11 21 31 41 51
| | | | | |
1 KNLFPAGPIA SLQASSMLTV PLLQAASHIP SMLQLCQLQP TTIQSPVYAS TQQPASTSAS 60
61 SLFSSSSSSA FHPFRPSESA QQSFPSSSVI VKIERRSPDS STDVNMPQPQ LQPGSSVIQQ 120
121 IGQPAPSGTP QPVIQAVQQG PSLLSALLSQ RRPSPTVPQS RTEHISGLNS PPRHTGNKSD 180
181 CESVSSSASF SPSHSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [320-401] |
1 11 21 31 41 51
| | | | | |
1 EDHSNYSNKS PQYVDRRRRN NEAAKRCRAN RRAVFEYRSR RVQLLEGENE DLRTQIETLK 60
61 AEIAHFKSVL AQRASVVTAL HP
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1hjbA |
| Description: | C/ebp beta |
| Matching Structure (courtesy of the PDB): |
|
