| Protein: | cpf-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 430 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cpf-1.
| Description | E-value | Query Range |
Subject Range |
|
|
507.0 | [0..2] | [429..1275] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MKPDIKDREY MYRLIIGQLF YDGHQQIAVN LANTLGCSAP APPPSDKLFR LVTIAKQFVE 60
61 DPDYKAEEKS SPMQFEPVSS GLDLEYDADV QPVSSEPS
|
| Detection Method: |  |
| Confidence: | 68.522879 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [99-430] |
1 11 21 31 41 51
| | | | | |
1 EYETIYLTVH KAPCRAAAFN SDGSLVATGS ADCSIKIMDV ERILAREKEH REMNENGPDA 60
61 HHPVIRTLYD HVDDVNTVIF HPRDSILISG SNDKTVKLFD FSKTAVKKAM KTLSEVYPVR 120
121 ALSCHPGGEF LLVATDHPTV RLYNIETAQA YASANPDDQH TESVTDVHYS ENARLYVTAS 180
181 KDGHVKIWDG VSNRCVETFK RAHDGSSICS AKFTKNGKYI LTSGMDSIVK LWELSTNRCL 240
241 IVYTGAGATG AQDFATNASF NHNEDYVLFP DEKSGSMCSW DARNSDRKRL LALGHTSACR 300
301 TFVHSPSMPA FMTGSDDHRA RFWYRKPATN EH
|
| Detection Method: | |
| Confidence: | 74.045757 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
