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View Structure Prediction Details

Protein: CE03273
Organism: Caenorhabditis elegans
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03273.

Description E-value Query
Range
Subject
Range
CE03272 - transcription factor AP-2 like status:Partially_confirmed UniProt:Q19863 protein_id:CAA92669.1
427.0 [0..3] [486..4]

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Predicted Domain #1
Region A:
Residues: [1-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSDYPSDI ADYSSFDNMM ADICNPSSSS SSNRKRQADP APDNFAKIPA GMATQPLYFP  60
   61 IHYPVNSGWQ SFDVNQVYNN HNMNQPGFGW VALPPPMPHN LQIPDQNSYK PRSGLPVPPP 120
  121 MAEFQDVNGI QQNPNEIFKN APITSAMCTP ESDISTSTNL TPDQDSAQLP LTEQELNEEK 180
  181 NFVVNIESPG KLAHYFLPNV E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [202-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEQEPNEHIP YPYAKSLFPT FGVPVSSDGN VVAEVVDGRL PAVGTRSKYD ITVDEIRRRC  60
   61 GAPEHMNQSA LYCFFRKSKK REAINRVKQV LTVHNIPMRT MQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [304-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQRKVTCFSP FLEEEATALA RDLDSISEEF LPINIIAQEM LEKLMSSGNN LDVCHRMLKN  60
   61 TTATITRVIK TLEVRQPKIT GQEEKLKGNN LDLSYHNFSL ITHGFGHPNS LSHYRSYLSI 120
  121 VERAVLLCEK IQNGQSLLSN EDVI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [448-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGQKPFERMS NEYFVEWQMN LYKKKLAKQM EEVEENKSQR GEHQQIHQHQ LYQQHHTNTH  60
   61 PPMPLMPPSQ MNLCPPITPI PPQNVYYY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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