| Protein: | aat-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 493 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aat-1.
| Description | E-value | Query Range |
Subject Range |
|
|
296.0 | [0..1] | [410..946] |
|
Region A: Residues: [1-404] |
1 11 21 31 41 51
| | | | | |
1 MTAEKEPLKS REGDEAPQNE TEGKGKGLEK SLTLFNGVSM IVGCIIGSGI FVSPTGVQEQ 60
61 AGSVGLSLIV WLISGIFTAI GAYCYAELGT LIKKSGGDYA YIMEAFGPFV AFIRLWIEAI 120
121 VVRPCTVTIV ALTFAIYGLR PFFPDCAPPD VVAELLAILL IVLMTAINCI SVRLATIVQD 180
181 WFTIAKVVAL CLIILTGLGL LFFGESQYKD SFENIFENTS QDFTKVSLAF YSGLFAYSGW 240
241 NFLNFIVEEL QNPKRNLPLA IAISITSCTV IYVLTNVALY TAISPDEMLE SPAVAVLFAN 300
301 KLYGKFAFIM PLCVACSTIG SANGVIFTSA RLFYSGAREG QMPAVLTMIN KKTKTPIPAV 360
361 ILTGALSIAY LLASKDVYQL INYIQISYWL AIGTAIAALF WLRR
|
| Detection Method: |  |
| Confidence: | 1.29 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [405-493] |
1 11 21 31 41 51
| | | | | |
1 TMPDASRPIK VPLIWPAIFL AGCIALVLIP MVAAPRDTGI GLLIMLSAVP VYGIFIGWKN 60
61 KPKWFNEFID SSTVFIQKLF MVVDEDKED
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
