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View Structure Prediction Details

Protein: CE03245
Organism: Caenorhabditis elegans
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03245.

Description E-value Query
Range
Subject
Range
gi|57108027 - gi|57108027|ref|XP_544171.1| PREDICTED: similar to CG7857-PA [Canis familiaris]
217.0 [0..15] [307..115]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDGEQDEE NPILARHRRE KKELRGKILA KKKAAKCGNK QMQKEAGAEC EKMEKEMDER  60
   61 HKKELEEAKK PEESEAVPAE NPEASTLSPP SPNPEGSDND GEGPSSSAFY KTVKISNKAA 120
  121 KKQDKKKKTA DKMKAAEAAD KEAGKNQLSD RQMEKAAVKE MLAEDHMKMI DIPA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [175-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGDCMYNAIS HQLQEEGIEI SVRKLRKRCG TYMREHSEDF RPFIEDMANM DSDSSWATYL  60
   61 GGVENVAEIG GVWGGELELK ACSMIFEKTI VVYKQYGGRH TIGEEYSSPK DRALRVVFLR 120
  121 HAYSLGEHYN STCPY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.0
Match: 1tffA
Description: Structure of Otubain-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.22902548931138 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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