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View Structure Prediction Details

Protein: CE03243
Organism: Caenorhabditis elegans
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03243.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
200.0 [0..9] [346..1847]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLKAELAQ AKIDIDQLEK KQWETLEQLV MRDKLIEQCS LHTEILQKDF RESEARIIQL  60
   61 EQQLLEPGEC GSELRATIKN QEELLKKQSE EIERCKEESR MLIQQKEEME NIHSEEIFGK 120
  121 NKTISNLRKQ IDGDVERKKA KIRTLRKELC SADMNTGKMC RRAKRAEDRI AKLESDLEEE 180
  181 RQKHVGQDIS HILDQHNSTV MALEMQLANT QQEKATLNTS VEDLKLRTEE WKHNLLGQFE 240
  241 VLTANSKREC ESKEEQIANH KREIMEKDSK IECLMELIQN SERSAEIQKM HDALREKDLK 300
  301 ISELSEKLQG LLINQEGEAD DTMIDQDDDN KSTHSEDSDG WDKINAI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle