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View Structure Prediction Details

Protein: lips-10
Organism: Caenorhabditis elegans
Length: 281 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lips-10.

Description E-value Query
Range
Subject
Range
lips-17 - Lipase status:Partially_confirmed UniProt:Q09611 protein_id:AAK31544.3
265.0 [0..6] [280..2]
gi|187033636, gi... - gi|39586959|emb|CAE62894.1| Hypothetical protein CBG07082 [Caenorhabditis briggsae], gi|187033636|em...
gi|157753888 - gi|157753888|ref|XP_001680656.1| Hypothetical protein CBG07082 [Caenorhabditis briggsae AF16]
255.0 [0..4] [278..1]

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Predicted Domain #1
Region A:
Residues: [1-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLFKSSLLL LIVIFGCAHA KFHTHFYNFL LGKFGKPIAD DLLRPDLGTK GSFGGGNPNA  60
   61 TGLPIVVIHG LAGYAGLSKK SLLNKYYSYG QPKGTVFATT YARGKLMDSL QHGMQCDYVL 120
  121 KVRTLILAVH EYTQKPVNII ACSMGSPITR KAILGGHCVD SGVNLGRPIN HLIHNYVSVG 180
  181 GANHGAIMCA KQPFVNGICS LTHGLDCRSK FLQEINSQPF QYGKNMFAIY SVADEVIGLR 240
  241 NTCGEMSSPL EGATSIVKTR LMHGAVIGGT TEDQWRALQT S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.045757
Match: 1t4mA
Description: STRUCTURE OF A THERMOSTABLE DOUBLE MUTANT OF BACILLUS SUBTILIS LIPASE OBTAINED THROUGH DIRECTED EVOLUTION
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle