| Protein: | gnrr-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 400 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gnrr-6.
| Description | E-value | Query Range |
Subject Range |
|
|
277.0 | [0..5] | [349..1] |
|
Region A: Residues: [1-323] |
1 11 21 31 41 51
| | | | | |
1 MFDRQMEVDN STIVETVAPT YLISDYIEIA YLGLVLLFGV PANAVILQKL IKEMKMSNRD 60
61 MVKSGFVMLK INLNITDLLI LTYSLGKLIW LITYKWIGGD YACRFYQMFS MFSLYSSSNI 120
121 VMCIALDRLR NVIYANQIHT KTDKISTVSI LAYSSWLAAL VCSLPQFFLF QTIEVYPNFV 180
181 QCSDIWQIRR HSQDDIAFFG KDSFVLTQTF ENSYNIAHLL LVFWGPLIVL IVTYAVIATK 240
241 LTKYSLKAPG TQSMRRPMPT AADDLPKEVV VHVNVEDGLL KKEGSIKKVV RCCAEELITK 300
301 QHRKKSNRRM RAKESTTTTS STS
|
| Detection Method: |  |
| Confidence: | 26.30103 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [324-400] |
1 11 21 31 41 51
| | | | | |
1 TRMPTWRKQM RSRVFRTTML VILTHFLFWF PYNALGLMKY INQSMFEVLS ANANIFKDLQ 60
61 ILITLINPFL YGFSTGN
|
| Detection Method: | |
| Confidence: | 1.87 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
