| Protein: | CE03185 |
| Organism: | Caenorhabditis elegans |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03185.
| Description | E-value | Query Range |
Subject Range |
|
|
469.0 | [0..1] | [527..16] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MACSWTFLWL LWIALVAVLL FALRGPLKIS ESLESVTATS YFNNLTPKFY VALTGTSSLV 60
61 SGIILIFEWW YFKNNAGIDA GDEEGSDNDE SIENTKTVPE CKVWRNPMAL FRAAEYNRFR 120
121 KETNSEPLTY YDMNLSAQDH Q
|
| Detection Method: |  |
| Confidence: | 8.568636 |
| Match: | PF04184.3 |
| Description: | No description for PF04184.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-446] |
1 11 21 31 41 51
| | | | | |
1 SLFMCDEDQG RAEYEIMQVA WRERESEERI QTARAALAIN PECASALVLL AEEESETVSQ 60
61 AENLLRRALR AIESTLNSYS NNQIASYAQN GDAVRKRDLT IQTYIKRRLA MCARKQGRLR 120
121 EAIKGFRDLS RDQSLSTLLS VQDNLIEACL EVQAYADVQN LLVRYDGYGA PCSYELREPR 180
181 SAAMSYTSAL LKVRAVAENF RCAADSSIRR GLSSAEQTAI EALTRAMEFN PHVPPYLLEL 240
241 RSMIMPPEHF LKRGDSEALA YAFFHIQHWK RIDGALQLLS IVWKDFVPKV SKDKNAFSSQ 300
301 LESAD
|
| Detection Method: | |
| Confidence: | 45.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.61989900880681 | bayes_pls_golite062009 |
| protein binding | 1.27250271601041 | bayes_pls_golite062009 |
|
Region A: Residues: [447-536] |
1 11 21 31 41 51
| | | | | |
1 KELLPSWHEQ SVFPKTEGTL MMLLQTFICL AICILAVLAQ QFPASSGEIF RTAATIGMQF 60
61 YENSVYTVSQ WAPGNIIPYL ASKQVPVPEL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
