YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE03147
Organism: Caenorhabditis elegans
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03147.

Description E-value Query
Range
Subject
Range
gi|20515184, gi|... - gi|20806728|ref|NP_621899.1| ribokinase family sugar kinase [Thermoanaerobacter tengcongensis MB4], ...
gi|20806728 - gi|20806728|ref|NP_621899.1| Sugar kinase, ribokinase family [Thermoanaerobacter tengcongensis MB4]
gi|254478103, gi... - gi|254478103|ref|ZP_05091486.1| ribokinase [Carboxydibrachium pacificum DSM 12653], gi|223490092|ref...
267.0 [0..35] [340..2]

Back

Predicted Domain #1
Region A:
Residues: [1-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQAGIFSHL KNFWKIILQF SKLKKKHIVM SSENQKIVVF GSIVQDLVSY TDSFPRPGES  60
   61 VRGHNFKLGS GGKGANQAVA AARLGINVSM IGMVGEDMFG DSNIKDLSSN GVDTSCVGRT 120
  121 KKTHTATATI TVNKEGENNI VVTLGANLEM SPEIADANSS KIAGSKMVIC QGEIDEKGNR 180
  181 RAFEIARSHG VTTFLNPAPG DPNMDKTILE LVDIICTNEN EAEFITGIAQ NNVKDAEKAA 240
  241 RAMLKMGPQH AIITLGGKGV LLASKGVDDV EHTAVIKVDA VDTTGAGDCF CGSLAAHLVA 300
  301 GHPISASIRS AANLAALSVT RHGTQSSYWK LDEIRQQYPE FLP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.69897
Match: 2fv7A
Description: Crystal structure of human ribokinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle